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mecfs_bio.analysis.pullit_body_fat_analysis

Script to analyze the body fat distribution GWAS from Pullit et al.

Full citation: Pulit, Sara L., et al. "Meta-analysis of genome-wide association studies for body fat distribution in 694 649 individuals of European ancestry." Human molecular genetics 28.1 (2019): 166-174.

Functions:

run_body_fat_distribution_analysis 

run_body_fat_distribution_analysis()

Analyze body fat distribution GWAS from pullit et al. Includes: - MAGMA analysis of key tissues using GTEx bulk RNAseq reference data

Source code in mecfs_bio/analysis/pullit_body_fat_analysis.py 
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def run_body_fat_distribution_analysis():
    """
    Analyze body fat distribution GWAS from pullit et al.
    Includes:
    - MAGMA analysis of key tissues using GTEx bulk RNAseq reference data

    """
    DEFAULT_RUNNER.run(
        [PULLIT_ET_AL_2018_COMBINED_MAGMA_TASKS.inner.bar_plot_task],
        incremental_save=True,
    )