mecfs_bio.build_system.task.external_file_copy_task

Task to copy a file from an external source. Used to testing.

Classes:

• ExternalFileCopyTask –

  Copies a file from an external source.

ExternalFileCopyTask

Bases: GeneratingTask

Copies a file from an external source. Used for testing

Methods:

• execute –

Attributes:

• deps (list[Task]) –
• external_path (Path) –
• meta (SimpleFileMeta) –

deps property

deps: list[Task]

external_path instance-attribute

external_path: Path

meta property

meta: SimpleFileMeta

execute

execute(
    scratch_dir: Path, fetch: Fetch, wf: WF
) -> FileAsset

Source code in mecfs_bio/build_system/task/external_file_copy_task.py

def execute(self, scratch_dir: Path, fetch: Fetch, wf: WF) -> FileAsset:
    target_path = scratch_dir / "target"
    shutil.copy(str(self.external_path), str(target_path))
    return FileAsset(target_path)