mecfs_bio.assets.gwas.myocardial_infarction.analysis.mi_ppp_rg

Attributes:

• MV_MI_PARQUET –
• MV_MI_PPP_RG_CIS_EXCLUDED –

MV_MI_PARQUET module-attribute

MV_MI_PARQUET = GwasLabSumstatsToTableTask.create_from_source_task(
    source_tsk=MILLION_VETERAN_MI_EUR_STANDARD_ANALYSIS.labeled_lead_variant_tasks.raw_sumstats_task,
    asset_id="mv_mi_keep_version_parquet_table_from_sumstats",
    sub_dir="processed",
    pipe=CompositePipe(
        [ComputeBetaPipe(), ComputeSEPipe()]
    ),
)

MV_MI_PPP_RG_CIS_EXCLUDED module-attribute

MV_MI_PPP_RG_CIS_EXCLUDED = generate_ppp_rg_assets(
    "mv_myocardial_infarction_ppp_rg_cis_excluded",
    trait_task=MV_MI_PARQUET,
    config=PppRgConfig(
        variant_set="cis_excluded",
        trait_total_sample_size=432053,
    ),
)