mecfs_bio.build_system.task.annotation_weights

Modules:

• build_baseline_lf_annotation_parquet_task –

  Build one sorted, allele-bearing annotation parquet from the baseline-LF

• chromosome_blocked_ridge –

  Weighted ridge regression accumulated per chromosome block.

• l2_sldsc_snpvar_task –

  Trait-specific per-SNP heritability (snpvar) prior via L2-regularized S-LDSC.

• ridge_annotation_weights_task –

  Fit a ridge surrogate of the polyfun prior on the baseline-LF annotations.

• stream_extract_annotation_parquets_task –

  Stream a polyfun baseline-LF tarball and keep only one kind of per-chromosome