mecfs_bio.constants.vocabulary_classes.gene_set

Classes:

• MSigDBGeneSetSpec –

  A reference to an MSIGDB gene set

MSigDBGeneSetSpec

A reference to an MSIGDB gene set exact_source, standard_name, systemic_name: column values for looking up a gene set. Setting one of these to None means it will not be used to retrieve the gene set.

Comment: documentation for human consumption. Not used in actual look up

Attributes:

• comment (str | None) –
• exact_source (str | None) –
• standard_name (str) –
• systematic_name (str | None) –

comment class-attribute instance-attribute

comment: str | None = None

exact_source instance-attribute

exact_source: str | None

standard_name instance-attribute

standard_name: str

systematic_name class-attribute instance-attribute

systematic_name: str | None = None