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mecfs_bio.assets.reference_data.thousand_genomes

Modules:

  • common_1kg_variants_eur_hg38 –

    Common biallelic SNVs from the 1000 Genomes 30x EUR panel (hg38), chrX included.

  • eur_hg19_vcf –

    The 1000 Genomes phase 3 EUR reference VCF (hg19), self-hosted and pinned by checksum.

  • eur_hg38_30x_vcf –

    The 1000 Genomes 30x EUR reference VCF (hg38), self-hosted and pinned by checksum.

  • eur_panel_allele_frequencies –

    Sites-only allele-frequency tables of the 1000 Genomes EUR panels, for