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figure_task_list

mecfs_bio.figures.figure_task_list

This file contains a list of figures to be exported for use in documentation

Attributes:

ALL_FIGURE_TASKS (list[Task]) –
MULTI_TISSUE_CHROMATIN_REF –
MULTI_TISSUE_GENE_EXPRESSION_REF –

ALL_FIGURE_TASKS `module-attribute`

ALL_FIGURE_TASKS: list[Task] = [
    DECODE_ME_GWAS_1_MANHATTAN_PLOT,
    DECODE_ME_GWAS_1_HERITABILITY_BY_LDSC_MD,
    DECODE_ME_GWAS_1_SUSIE_FINEMAP_CHR1_173_000_001_LOCUS_STACKPLOT,
    DECODE_ME_MAGMA_GENE_PLOT,
    DECODE_ME_MAGMA_GENE_PLOT_WITH_WINDOW,
    gene_manhattan_plot_task,
    gene_manhattan_plot_task,
    gene_manhattan_plot_task,
    gene_manhattan_plot_task,
    gene_manhattan_plot_task,
    gene_manhattan_plot_task,
    CT_LDSC_INITIAL_PLOT,
    extracted_plot_task,
    bar_plot_task,
    plot_task_unwrap,
    plot_task_unwrap,
    extracted_plot_task,
    bar_plot_task,
    plot_task_unwrap,
    power_plot_task,
    qq_plot_task,
    result_markdown_table_task,
    bar_plot_task_full,
    power_plot_task,
    qq_plot_task,
    result_markdown_table_task,
    JOHNSTON_MAGMA_GENE_PLOT,
    extracted_plot_task,
    independent_clusters_markdown_task_unwrap,
    bar_plot_task,
    bar_plot_task,
    extracted_plot_task,
    independent_clusters_markdown_task_unwrap,
    magma_independent_cluster_plot_unwrap,
    plot_task_unwrap,
    result_table_markdown_task,
    MV_LDL_LDSC_RESULTS_MARKDOWN,
    heritability_markdown_task_unwrap,
    bar_plot_task,
    plot_task_unwrap,
    plot_task_unwrap,
    heritability_markdown_task_unwrap,
    bar_plot_task,
    plot_task_unwrap,
    heritability_markdown_task_unwrap,
    heritability_markdown_task_unwrap,
    bar_plot_task,
    downstream_trait_tables["MI"],
    heritability_markdown_task_unwrap,
    heritability_markdown_task_unwrap,
    heritability_markdown_task_unwrap,
    bar_plot_task,
    aggregation_markdown_task,
    heritability_markdown_task_unwrap,
    bar_plot_task,
    aggregation_markdown_task,
]

MULTI_TISSUE_CHROMATIN_REF `module-attribute`

MULTI_TISSUE_CHROMATIN_REF = 'multi_tissue_chromatin'

MULTI_TISSUE_GENE_EXPRESSION_REF `module-attribute`

MULTI_TISSUE_GENE_EXPRESSION_REF = (
    "multi_tissue_gene_expression"
)